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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915308.1_cds_XP_016465165.1_58139
CDS Infomation

[gene=LOC107788038] [db_xref=GeneID:107788038] [protein=caffeic acid 3-O-methyltransferase] [protein_id=XP_016465165.1] [location=join(111147..111565,112340..112650,112764..112828,113318..113614)] [gbkey=CDS]
Sequence

ATGGGTTCAACAAGCGAGAGCCAGAGTAACAGTCTCACTCACACAGAAGACGAAGCTTTC
TTATTTGCCATGCAATTGTGTAGTGCTTCTGTACTTCCTATGGTCCTAAAATCAGCCGTA
GAACTTGACCTTCTTGAGCTAATGGCTAAGGCTGGTCCAGGTGCAGCTATTTCTCCTTCT
GAATTAGCTGCTCAGCTCTCAACTCAGAACCCAGAAGCACCTGTTATGCTTGATCGGATG
CTTAGGCTACTTGCTTCTTACTCTGTTCTCAATTGTACTCTTAGAACACTGCCTGATAGC
AGTGTTGAGAGGCTTTATAGTCTGGCTCCCGTCTGTAAGTACTTGACTAAGAATGCTGAT
GGTGTTTCTGTTGCCCCACTTTTGCTTATGAATCAAGATAAAGTTCTTATGGAGAGCTGG
TACCACTTAAAAGATGCAGTACTAGATGGCGGAATCCCATTCAACAAAGCCTATGGAATG
ACAGCATTTGAGTACCATGGCACAGATCCAAGATTCAACAAAGTGTTCAACCGTGGAATG
TCTGATCACTCCACTATGTCAATGAAGAAGATTCTTGAGGACTACAAAGGATTTGAAGGC
CTAAATTCCATTGTTGATGTTGGTGGTGGAACGGGTGCTACAGTTAACATGATTGTCTCT
AAATATCCCTCTATTAAGGGCATTAACTTTGATTTGCCACATGTAATTGGAGATGCTCCA
ACTTACCCCGGTGTCGAGCACGTTGGTGGCGACATGTTTGCTAGTGTGCCAAAAGCAGAT
GCCATTTTCATGAAGTGGATTTGTCATGATTGGAGCGATGAGCATTGCCTAAAATTCTTG
AAGAATTGCTATGAAGCACTACCTGCAAATGGGAAGGTGATAATTGCAGAGTGCATACTT
CCAGAGGCCCCAGATACATCACTTGCAACTAAGAATACAGTACATGTTGATATTGTGATG
TTAGCACATAACCCAGGAGGCAAAGAAAGGACTGAGAAGGAATTTGAGGCTTTGGCTAAG
GGCGCTGGTTTTACTGGTTTCCGCAAGGCTTGTTGCGCTTACAACACTTGGGTCATGGAA
TTCAACAAGTAA

Peptide Sequence

PEP ID

XP_016465165.1
PEP Infomation

PREDICTED: caffeic acid 3-O-methyltransferase [Nicotiana tabacum]
Sequence

MGSTSESQSNSLTHTEDEAFLFAMQLCSASVLPMVLKSAVELDLLELMAKAGPGAAISPS
ELAAQLSTQNPEAPVMLDRMLRLLASYSVLNCTLRTLPDSSVERLYSLAPVCKYLTKNAD
GVSVAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGM
SDHSTMSMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIGDAP
TYPGVEHVGGDMFASVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVIIAECIL
PEAPDTSLATKNTVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRKACCAYNTWVME
FNK

Transcript Sequence

Gene sequence data has not been registered.